Musa Genotyping Center Results (diploids)

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The Musa Genotyping Centre was established at the Laboratory of Molecular Cytogenetics and Cytometry of the Institute of Experimental Botany (IEB), Olomouc, Czech Republic in 2009. A standardized platform for molecular characterization has been developed for Musa germplasm (Christelová et al. 2011). The system is based on 19 microsatellite loci that are scored after the PCR with fluorescently labeled primers and capillary electrophoretic separation with internal standard (GeneScanTM-500 LIZ size standard, Applied Biosystems). The PCR products are multiplexed prior to the separation and loaded onto the automatic 96-capillary ABI 3730xl DNA Analyzer. Electrophoretic separation and signal detection is carried out with default module settings.
Here we provide an Unrooted NJ tree with 221 diploids accessions using 19 SSR markers.
Source of data: Musa Genotyping Centre
Source of Tree: Institute of Experimental Botany (IEB)

See all accessions used in this study

Showing 40 of 219 accessions
Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
Uwati ITC0373 AA Unknown Papua New Guinea ITC
Racadag ITC0434 AA Unknown Philippines ITC
Higa ITC0378 acuminata Unknown Indonesia ITC
Musa beccarii ITC1070 beccarii subsp. beccarii Unknown ITC
Tavoy ITC0072 acuminata subsp. burmannica Unknown ITC
Pisang Serun 404 ITC1348 acuminata subsp. malaccensis Unknown ITC
Pisang Serun 400 ITC1349 acuminata subsp. malaccensis Malaysia ITC
Khae (Phrae) ITC0660 acuminata subsp. siamea Thailand ITC
Zebrina (G.F.) ITC0966 acuminata subsp. zebrina Unknown ITC
Morong Princesa ITC1150 AA Unknown Unknown ITC
AAcv Rose ITC0712 AA Unknown Indonesia ITC
Higa ITC0428 acuminata subsp. banksii Unknown ITC
Malaccensis ITC0250 acuminata subsp. malaccensis Unknown ITC
Diploide EMBRAPA 204 ITC1192 AA Unknown Brazil ITC
Pu-te La-Bum ITC0446 AA Unknown Malaysia ITC
Pisang Pipit ITC0685 AA Unknown Indonesia ITC
Pa (Songkhla) ITC0408 acuminata Unknown Unknown ITC
Banksii ITC0623 acuminata subsp. banksii Papua New Guinea ITC
Paliama ITC0766 acuminata subsp. banksii Unknown ITC
Pisang Kermian ITC0437 AA Unknown Malaysia ITC
Binaktong ITC1181 AA Unknown Unknown ITC
Te'engi ITC0951 AA Unknown Papua New Guinea ITC
Balbisiana (10852) ITC0094 balbisiana Unknown Unknown ITC
Morong Princesa ITC0310 AA subgr. Pisang Jari Buaya Philippines ITC
Musa textilis ITC0539 textilis subsp. textilis Unknown ITC
Tomolo ITC1187 AA Unknown Papua New Guinea ITC
Pisang Mas ITC0653 AA subgr. Sucrier Unknown ITC
Mambee Thu ITC0612 AA Unknown Unknown ITC
Tani ITC1120 balbisiana Unknown Unknown ITC
Cameroun ITC0246 balbisiana Unknown Unknown ITC
Pisang Oli ITC1157 AA Unknown Indonesia ITC
Mshale ITC1223 AA Unknown Tanzania ITC
Pamoti On ITC1229 AA Unknown Unknown ITC
Mpiajhap ITC0773 AA Unknown Papua New Guinea ITC
Inori ITC0850 AA Unknown Papua New Guinea ITC
Yangun Yefan ITC0984 AA Unknown Papua New Guinea ITC
Kokopo ITC1243 AA Unknown Papua New Guinea ITC
Maleb ITC0809 AA Unknown Papua New Guinea ITC
Hova ITC0847 AA Unknown Papua New Guinea ITC
Mala ITC0869 AA Unknown Papua New Guinea ITC