DArT whole genome profiling of ITC accessions

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Marker type: 
DArT
Description of the dataset: 

This study was composed of 94 wild accessions and of 481 cultivated accessions. Darwin 5.0 (Perrier and Jacquemoud-Collet, 2006; Perrier et al., 2003) was used to calculate genetic distances between pairs of the 535 accessions (out of 575 of the published study). To do so, both modalities (0,1) were given equal weight using the Sokal and Michener (1958) dissimilarity index as the proportion of unmatching markers. we built a neighbor-joining (NJ) tree (Saitou and Nei, 1987) with the diploid accessions composed of A and B genomes only . With regard to the evolutionary history of cultivated bananas, we then built a second NJ tree with all the accessions composed of A and B genomes under the constraint of the diploid tree topology.

See all accessions used in this study

Showing 40 of 531 accessions
Accession Namesort descending Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
73.53
ITC0572 AAA subgr. Cavendish Unknown ITC
A3617/9
ITC0530 acuminata Unknown Unknown ITC
AAcv Rose ITC0712 AA Unknown Indonesia ITC
Adina ITC0893 AA Unknown Papua New Guinea ITC
Agu ITC0833 AAA Unknown Papua New Guinea ITC
Agul ITC0782 AA Unknown Papua New Guinea ITC
Agutay ITC1028 acuminata Unknown Unknown ITC
Aivip ITC0785 AA Unknown Papua New Guinea ITC
Akondro Mainty ITC0281 AA Unknown Unknown ITC
Akpakpak ITC0217 AAB subgr. Plantain Nigeria ITC
Amas (South Johnstone) ITC0567 AA Unknown Unknown ITC
Ambiri ITC0823 AAA Unknown Papua New Guinea ITC
Ambo I ITC1038 AAB Unknown Unknown ITC
Americani ITC0557 AAA Unknown Unknown ITC
Apantu ITC0223 AAB subgr. Plantain Unknown ITC
Apindikay ITC0985 AA Unknown Papua New Guinea ITC
Atali Kiogo ITC0208 AAB subgr. Plantain Unknown ITC
Auko ITC0987 AB Unknown Papua New Guinea ITC
Auko ITC1239 AB Unknown Papua New Guinea ITC
Auko ITC0983 AB Unknown Papua New Guinea ITC
Avalira ITC0986 AA Unknown Papua New Guinea ITC
Awondaeke ITC0884 AA Unknown Papua New Guinea ITC
Bagul ITC0814 AAA Unknown Papua New Guinea ITC
Bakurura
ITC0170 AAA subgr. Mutika/Lujugira Unknown ITC
Balbisiana ITC0342 balbisiana Unknown Unknown ITC
Balbisiana ITC0080 balbisiana Unknown Unknown ITC
Balbisiana ITC0545 balbisiana Unknown Unknown ITC
Balbisiana ITC0626 balbisiana Unknown Papua New Guinea ITC
Balbisiana ITC1016 balbisiana Unknown Papua New Guinea ITC
Balbisiana ITC0211 balbisiana Unknown Unknown ITC
Balbisiana (10852) ITC0094 balbisiana Unknown Unknown ITC
Balonkawe ITC0473 ABB Unknown Philippines ITC
Banane Cochon
ITC1036 AAA Unknown Unknown ITC
Banane Rouge
ITC1040 Unknown Unknown Unknown ITC
Banksii ITC0621 acuminata subsp. banksii Papua New Guinea ITC
Banksii ITC0453 acuminata subsp. banksii Unknown ITC
Banksii ITC0806 acuminata subsp. banksii Papua New Guinea ITC
Banksii ITC0341 acuminata subsp. banksii Unknown ITC
Banksii ITC0620 acuminata subsp. banksii Papua New Guinea ITC
Banksii ITC0623 acuminata subsp. banksii Papua New Guinea ITC

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