Musa Genotyping Center Results (triploids)

Publication title or Reference: 

Marker type: 
Description of the dataset: 

The Musa Genotyping Centre was established at the Laboratory of Molecular Cytogenetics and Cytometry of the Institute of Experimental Botany (IEB), Olomouc, Czech Republic in 2009. A standardized platform for molecular characterization has been developed for Musa germplasm (Christelová et al. 2011). The system is based on 19 microsatellite loci that are scored after the PCR with fluorescently labeled primers and capillary electrophoretic separation with internal standard (GeneScanTM-500 LIZ size standard, Applied Biosystems). The PCR products are multiplexed prior to the separation and loaded onto the automatic 96-capillary ABI 3730xl DNA Analyzer. Electrophoretic separation and signal detection is carried out with default module settings.

Here we provide an Unrooted NJ tree with 171 triploids accession using 19 SSR markers genotyped as described in Christelová et al. 2011.
Source of data: Musa Genotyping Centre
Source of Tree: Institute of Experimental Botany (IEB)

See all accessions used in this study

Showing 10 of 170 accessions
Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
ITC0022 AAB subgr. Plantain Gabon ITC
ITC0033 AAB subgr. Plantain Indonesia ITC
ITC0007 AAB subgr. Plantain Unknown ITC
ITC1126 AAB subgr. Plantain Unknown ITC
3 Vert
ITC1127 AAB subgr. Plantain Unknown ITC
Red Yade
ITC1140 AAB subgr. Plantain Unknown ITC
Mbang Okon
ITC0118 AAB subgr. Plantain Unknown ITC
ITC0119 AAB subgr. Plantain Unknown ITC
ITC1554 AAB subgr. Plantain Tanzania ITC
ITC0718 AAB subgr. Plantain Comoros ITC