Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps

TitleChromosome-scale assemblies of plant genomes using nanopore long reads and optical maps
Publication TypeJournal Article
Year of Publication2018
AuthorsBelser C, Istace B, Denis E, Dubarry M, Baurens F-C, Falentin C, Genete M, Berrabah W, Chèvre A-M, Delourme R, Deniot G, Denoeud F, Duffé P, Engelen S, Lemainque A, Manzanares-Dauleux M, Martin G, Morice J, Noel B, Vekemans X, D’Hont A, Rousseau-Gueutin M, Barbe V, Cruaud C, Wincker P, Aury J-M
JournalNature Plants
Volume4
Pagination879
ISSN2055-0278
Abstract

Assembling genomes to chromosome scale remains a challenge. Now, a study reports a strategy based on nanopore long reads and optical maps and uses it to produce high-quality chromosome-scale assemblies for the genomes of yellow sarson, broccoli and banana.

URLhttps://www.nature.com/articles/s41477-018-0289-4
DOI10.1038/s41477-018-0289-4
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Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
Schizocarpa
ITC0926 schizocarpa Unknown Papua New Guinea ITC