We are currently making links between Genetic resources and the genomic resources available in the Banana Genome Hub ( Droc et al, 2013).
Genetic diversity use case
This use case requires the following elements:
- List of sample conserved in a collection documented in MGIS
- Public diversity tree computed with GBS data
- SNPs mapped on the Musa genome reference sequence
The list of samples can be loaded in MGIS as well as the genetic tree with associated metadata (e.g. references). The mapped SNPs can be loaded in the Genome Browser and Chromose viewer of the Banana Genome Hub. It will facilitate exploration of genomic context by accession as summarized below.