Some results of molecular characterization (e.g. SSR, DArT, SNP) related to Germplasm accessions in collections can be stored in MGIS.
From an accession:
It redirects you to a page dedicated a genotyping study including:
- Reference to the study (e.g. publication)
- Experimental description (e.g. number of accessions, type of genetic algorithm)
- List of all accessions used in the diversity studies
- Diversity tree viewer
The diversity tree viewer (see below) is powered by IntreeGreat developed in the South Green bioinfomatics platform.
MGIS provides access to SNPs allelic diversity from Next-Generation Sequencing data (e.g. GBS or RADseq).
The NGS Markers module is powered by Gigwa developed in the South Green bioinfomatics platform.