Publication title or Reference:
.
0. Unpublished data.
Marker type:
SNP
Description of the dataset:
The TRC is a set of 33 accessions representative of the overall banana diversity that were selected by a panel of experts to be used as references and standards for the characterization and identification of Musa accessions (cultivated and closed relatives). Currently, the TRC is being characterized in 12 partner collections and is used to test the robustness of standard descriptors across environments.
Here we provide a genetic tree of 33 accessions with 12617 SNP markers obtained from GBS (PST1 enzyme). Computed with SNPhylo (Lee et al, 2014) with the following parameters : bootstrap x 100; MAF > 0.05 ; minimum coverage 10 reads.
Source of data and Tree: Bioversity
See all accessions used in this study
Showing 33 of 33 accessions
| Accession Name | Pictures | Accession number | Species / Group | SubSpecies / SubGroup | Origin | Collection | Available for distribution | |
|---|---|---|---|---|---|---|---|---|
| Safet Velchi | ITC0245 | AB | subgr. Ney Poovan | India | ITC |
 |
|
|
| Figue Pomme Géante | ITC0769 | AAB | subgr. Silk | Unknown | ITC |
|
|
|
| Namwa Khom | ITC0659 | ABB | subgr. Pisang Awak | Thailand | ITC |
|
|
|
| Khai Thong Ruang | ITC0662 | AAA | subgr. Ibota | Thailand | ITC |
|
|
|
| Foconah | ITC0649 | AAB | subgr. Pome | Unknown | ITC |
|
|
|
| Calcutta 4 | ITC0249 | acuminata | subsp. burmannicoides | Myanmar | ITC |
|
|
|
| Pisang Lilin | ITC1121 | AA | Unknown | Unknown | ITC |
|
|
|
| Pelipita | ITC0472 | ABB | Unknown | Philippines | ITC |
|
|
|
| Zebrina | ITC1177 | acuminata | subsp. zebrina | Unknown | ITC |
|
|
|
| Pisang Jari Buaya | ITC0312 | AA | subgr. Pisang Jari Buaya | Malaysia | ITC |
|
|
|
| Paliama | ITC0766 | acuminata | subsp. banksii | Unknown | ITC |
|
|
|
| Pisang Palembang | ITC0450 | AAB | subgr. Pisang Kelat | Malaysia | ITC |
 |
|
|
| Petite Naine | ITC0654 | AAA | subgr. Cavendish | Unknown | ITC |
|
|
|
| Pisang Ceylan | ITC1441 | AAB | subgr. Mysore | Unknown | ITC |
|
|
|
| Blue Java | ITC0361 | ABB | subgr. Ney Mannan | Unknown | ITC |
|
|
|
| Leite | ITC0277 | AAA | subgr. Rio | Unknown | ITC |
|
|
|
| Tomolo | ITC1187 | AA | Unknown | Papua New Guinea | ITC |
|
|
|
| Pisang Mas | ITC0653 | AA | subgr. Sucrier | Unknown | ITC |
|
|
|
| Tani | ITC1120 | balbisiana | Unknown | Unknown | ITC |
|
|
|
| Dole | ITC0767 | ABB | subgr. Bluggoe | Unknown | ITC |
|
|
|
| Simili Radjah | ITC0123 | ABB | subgr. Peyan | Unknown | ITC |
|
|
|
| Igitsiri (Intuntu) | ITC0081 | AAA | subgr. Mutika/Lujugira | Burundi | ITC |
|
|
|
| Uzakan | ITC0825 | AAB | Unknown | Papua New Guinea | ITC |
|
|
|
| Mai'a popo'ulu moa | ITC1169 | AAB | subgr. Maia Maoli/Popoulu | Unknown | ITC |
|
|
|
| Obubit Ntanga green mutant | ITC0519 | AAB | subgr. Plantain | Unknown | ITC |
|
|
|
| Red Dacca | ITC0575 | AAA | subgr. Red | Unknown | ITC |
|
|
|
| Mbwazirume | ITC0084 | AAA | subgr. Mutika/Lujugira | Burundi | ITC |
|
|
|
| Honduras | ITC0247 | balbisiana | Unknown | Honduras | ITC |
|
|
|
| Monthan | ITC1483 | ABB | subgr. Monthan | Unknown | ITC |
|
|
|
| Ihitisim | ITC0121 | AAB | subgr. Plantain | Nigeria | ITC |
|
|
|
| Gros Michel | ITC1481 | AAA | subgr. Gros Michel | Unknown | ITC |
|
|
|
| Pisang Rajah (South Johnstone) | ITC0587 | AAB | subgr. Pisang Raja | Unknown | ITC |
|
|
|
| Orishele | ITC1325 | AAB | subgr. Plantain | Nigeria | ITC |
|
|