Musa Genotyping Center Results (diploids)

Publication title or Reference: 

Marker type: 
SSR
Description of the dataset: 

The Musa Genotyping Centre was established at the Laboratory of Molecular Cytogenetics and Cytometry of the Institute of Experimental Botany (IEB), Olomouc, Czech Republic in 2009. A standardized platform for molecular characterization has been developed for Musa germplasm (Christelová et al. 2011). The system is based on 19 microsatellite loci that are scored after the PCR with fluorescently labeled primers and capillary electrophoretic separation with internal standard (GeneScanTM-500 LIZ size standard, Applied Biosystems). The PCR products are multiplexed prior to the separation and loaded onto the automatic 96-capillary ABI 3730xl DNA Analyzer. Electrophoretic separation and signal detection is carried out with default module settings.
Here we provide an Unrooted NJ tree with 221 diploids accessions using 19 SSR markers.
Source of data: Musa Genotyping Centre
Source of Tree: Institute of Experimental Botany (IEB)

See all accessions used in this study

Showing 40 of 219 accessions
Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
Odwa ITC0889 AA Unknown Papua New Guinea ITC
Fu Des ITC0939 AA Unknown Papua New Guinea ITC
Kwaro ITC0943 AA Unknown Papua New Guinea ITC
Wiliman ITC0949 AA Unknown Papua New Guinea ITC
Tonton Kepa ITC0822 AS Unknown Papua New Guinea ITC
Hawain 3 ITC0602 acuminata subsp. banksii Papua New Guinea ITC
Borneo ITC0253 acuminata subsp. microcarpa Malaysia ITC
Spiral ITC1206 AA Unknown Papua New Guinea ITC
Katual Vunalir ITC0788 AA Unknown Papua New Guinea ITC
Garunga ITC0798 AA Unknown Papua New Guinea ITC
Sepi ITC0849 AA Unknown Papua New Guinea ITC
Wikago ITC0888 AA Unknown Papua New Guinea ITC
Adina ITC0893 AA Unknown Papua New Guinea ITC
Gorop ITC0778 AA Unknown Papua New Guinea ITC
Enar ITC0818 AA Unknown Papua New Guinea ITC
Kuspaka ITC0840 AA Unknown Papua New Guinea ITC
Awondaeke ITC0884 AA Unknown Papua New Guinea ITC
Banksii ITC0620 acuminata subsp. banksii Papua New Guinea ITC
Meinje ITC1015 AA Unknown Papua New Guinea ITC
Yalumia ITC1220 AA Unknown Papua New Guinea ITC
Mapua ITC1244 AA Unknown Papua New Guinea ITC
Akondro Mainty ITC0281 AA Unknown Unknown ITC
Waimara ITC0600 AA Unknown Papua New Guinea ITC
Navaradam ITC0770 AA Unknown Papua New Guinea ITC
Himone ITC0886 AA Unknown Papua New Guinea ITC
Grupnai ITC0887 AA Unknown Papua New Guinea ITC
Pai ka ITC0892 AA Unknown Papua New Guinea ITC
Yapu Yapu ITC0923 AA Unknown Papua New Guinea ITC
Ato ITC0820 AS Unknown Papua New Guinea ITC
Paliama ITC0766 acuminata subsp. banksii Unknown ITC
Banksii ITC0806 acuminata subsp. banksii Papua New Guinea ITC
Musa acuminata ssp. banksii ITC0896 acuminata subsp. banksii Papua New Guinea ITC
Long Tavoy ITC0283 acuminata subsp. burmannica Unknown ITC
Musa coccinea ITC0287 coccinea subsp. coccinea Unknown ITC
Menei ITC1021 Fe'i Unknown Papua New Guinea ITC
Musa peekelii ssp. peekelii ITC0917 peekelii subsp. peekelii Papua New Guinea ITC
Saing Todloh ITC0316 AA subgr. Pisang Jari Buaya Unknown ITC
Truncata ITC0393 acuminata subsp. truncata Unknown ITC
Musa velutina ITC0638 velutina subsp. velutina Unknown ITC
Tjau Lagada ITC0090 AA Unknown Unknown ITC

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