DArT whole genome profiling of ITC accessions

Publication title or Reference: 

Marker type: 
DArT
Description of the dataset: 

This study was composed of 94 wild accessions and of 481 cultivated accessions. Darwin 5.0 (Perrier and Jacquemoud-Collet, 2006; Perrier et al., 2003) was used to calculate genetic distances between pairs of the 535 accessions (out of 575 of the published study). To do so, both modalities (0,1) were given equal weight using the Sokal and Michener (1958) dissimilarity index as the proportion of unmatching markers. we built a neighbor-joining (NJ) tree (Saitou and Nei, 1987) with the diploid accessions composed of A and B genomes only . With regard to the evolutionary history of cultivated bananas, we then built a second NJ tree with all the accessions composed of A and B genomes under the constraint of the diploid tree topology.

See all accessions used in this study

Showing 40 of 531 accessions
Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
Mai'a hapai ITC1172 AA subgr. Sucrier Unknown ITC
Sira ITC0907 AA Unknown Papua New Guinea ITC
Kerua ITC0827 AAB Unknown Papua New Guinea ITC
Kospuke
ITC1011 AA Unknown Papua New Guinea ITC
Pogpogon
ITC1184 AA Unknown Unknown ITC
Namor
ITC1190 AA Unknown Papua New Guinea ITC
Marakudu
ITC1210 AA Unknown Papua New Guinea ITC
Senorita
ITC1230 AA Unknown Unknown ITC
Datil
ITC1252 AA Unknown Unknown ITC
Mjenga Gros Michel Diploide
ITC1253 AA Unknown Unknown ITC
Bom
ITC1438 AA Unknown Vietnam ITC
Heva
ITC0257 AA Unknown Unknown ITC
NBA 14
ITC0267 AA Unknown Unknown ITC
Niyarma Yik
ITC0269 AA Unknown Unknown ITC
Pisang Madu
ITC0276 AA Unknown Unknown ITC
Djum Tau
ITC0292 AA Unknown Indonesia ITC
Pitu
ITC0294 AA Unknown Unknown ITC
Guyod
ITC0299 AA Unknown Philippines ITC
Dátil
ITC0392 AA Unknown Unknown ITC
Pamoti-On
ITC0432 AA Unknown Philippines ITC
Tin-Yo I-King
ITC0436 AA Unknown Malaysia ITC
Diploid Basilan
ITC0438 AA Unknown Philippines ITC
Pu-te Wey
ITC0447 AA Unknown Malaysia ITC
Posok
ITC0470 AA Unknown Papua New Guinea ITC
Pisang Tongat
ITC0063 AA Unknown Unknown ITC
Kirun
ITC0714 AA Unknown Unknown ITC
Nzumoheli I
ITC0717 AA Unknown Comoros ITC
Onato
ITC0866 AA Unknown Papua New Guinea ITC
Grinai
ITC0950 AA Unknown Papua New Guinea ITC
Pisang Gu Nin Chio
ITC0975 AA Unknown Unknown ITC
Pisang Raja Udang
ITC0976 AA Unknown Unknown ITC
Banane Cochon
ITC1036 AAA Unknown Unknown ITC
Pisang Lemak Manis
ITC1183 AAA Unknown Unknown ITC
Pisang Berangan
ITC1287 AAA Unknown Unknown ITC
NAM
ITC1303 AAA Unknown Unknown ITC
Paji
ITC1305 AAA Unknown Tanzania ITC
Toowoolee
ITC0268 AAA Unknown Unknown ITC
Marauw
ITC0303 AAA Unknown Papua New Guinea ITC
Medja
ITC0306 AAA Unknown Indonesia ITC
Biu Ketip
ITC0319 AAA Unknown Indonesia ITC

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