DArT whole genome profiling of ITC accessions

Publication title or Reference: 

Marker type: 
DArT
Description of the dataset: 

This study was composed of 94 wild accessions and of 481 cultivated accessions. Darwin 5.0 (Perrier and Jacquemoud-Collet, 2006; Perrier et al., 2003) was used to calculate genetic distances between pairs of the 535 accessions (out of 575 of the published study). To do so, both modalities (0,1) were given equal weight using the Sokal and Michener (1958) dissimilarity index as the proportion of unmatching markers. we built a neighbor-joining (NJ) tree (Saitou and Nei, 1987) with the diploid accessions composed of A and B genomes only . With regard to the evolutionary history of cultivated bananas, we then built a second NJ tree with all the accessions composed of A and B genomes under the constraint of the diploid tree topology.

See all accessions used in this study

Showing 40 of 531 accessions
Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
Chuoi Tieu xanh ITC1406 AAA subgr. Cavendish Vietnam ITC
Chuoi Ben tre ITC1410 AAA subgr. Cavendish Vietnam ITC
Canara ITC1240 Unknown Unknown Unknown ITC
Kamaramasenge ITC0127 AAB subgr. Kamaramasenge Unknown ITC
Kitawira ITC0137 AAA subgr. Mutika/Lujugira Unknown ITC
Gashulie ITC0149 AAA subgr. Mutika/Lujugira Unknown ITC
Rugondo ITC0164 AAA subgr. Mutika/Lujugira Unknown ITC
Imbogo ITC0168 AAA subgr. Mutika/Lujugira Unknown ITC
Inkira ITC0179 AAA subgr. Mutika/Lujugira Unknown ITC
Blue Java ITC0361 ABB subgr. Ney Mannan Unknown ITC
Pisang Raja Bulu ITC0843 AAB subgr. Pisang Raja Indonesia ITC
Sport of Silk ITC1222 AAB subgr. Silk Tanzania ITC
Pisang Mas ITC0653 AA subgr. Sucrier Unknown ITC
Banksii ITC0453 acuminata subsp. banksii Unknown ITC
Pisang Mulik ITC0433 AA Unknown Malaysia ITC
Monjet ITC0462 AA Unknown Papua New Guinea ITC
Mambee Thu ITC0612 AA Unknown Unknown ITC
Pisang Bakar ITC1064 AAA subgr. Ambon Indonesia ITC
Cameroun ITC0246 balbisiana Unknown Unknown ITC
Gipungusi ITC0173 ABB subgr. Bluggoe Unknown ITC
Dwarf Cavendish ITC0002 AAA subgr. Cavendish Unknown ITC
Pisang Masak Hijau ITC0340 AAA subgr. Cavendish Unknown ITC
Robusta ITC0574 AAA subgr. Cavendish Unknown ITC
Kikundi ITC1224 AAA subgr. Mutika/Lujugira Tanzania ITC
Kazirakwe ITC1355 AAA subgr. Mutika/Lujugira Unknown ITC
Chibulangombe ITC0138 AAA subgr. Mutika/Lujugira Unknown ITC
Kagera ITC0141 AAA subgr. Mutika/Lujugira Unknown ITC
Ingarama ITC0160 AAA subgr. Mutika/Lujugira Unknown ITC
N'Dundu ITC0732 AAA subgr. Mutika/Lujugira Unknown ITC
Nakitengwa ITC0085 AAA subgr. Mutika/Lujugira Burundi ITC
Ice cream ITC0020 ABB subgr. Ney Mannan Gabon ITC
Pisang Oli ITC1157 AA Unknown Indonesia ITC
Mshale ITC1223 AA Unknown Tanzania ITC
Pamoti On ITC1229 AA Unknown Unknown ITC
Williams (Bell, South Johnstone) ITC0570 AAA subgr. Cavendish Unknown ITC
Indemera y'Imbihire ITC0161 AAA subgr. Mutika/Lujugira Unknown ITC
Ikimaga ITC0171 AAA subgr. Mutika/Lujugira Unknown ITC
Te'engi ITC0951 AA Unknown Papua New Guinea ITC
UPLB ITC0343 acuminata subsp. banksii Unknown ITC
Banksii ITC0853 acuminata subsp. banksii Papua New Guinea ITC

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