DArT whole genome profiling of ITC accessions

Publication title or Reference: 

Marker type: 
DArT
Description of the dataset: 

This study was composed of 94 wild accessions and of 481 cultivated accessions. Darwin 5.0 (Perrier and Jacquemoud-Collet, 2006; Perrier et al., 2003) was used to calculate genetic distances between pairs of the 535 accessions (out of 575 of the published study). To do so, both modalities (0,1) were given equal weight using the Sokal and Michener (1958) dissimilarity index as the proportion of unmatching markers. we built a neighbor-joining (NJ) tree (Saitou and Nei, 1987) with the diploid accessions composed of A and B genomes only . With regard to the evolutionary history of cultivated bananas, we then built a second NJ tree with all the accessions composed of A and B genomes under the constraint of the diploid tree topology.

See all accessions used in this study

Showing 40 of 531 accessions
Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
Pisang Berlin ITC0611 AA Unknown Unknown ITC
Pisang Perecet ITC0695 AA Unknown Indonesia ITC
Pisang Papan ITC1061 AAA Unknown Indonesia ITC
Wh-o-gu ITC0078 AAA Unknown Papua New Guinea ITC
Pisang Lawadin ITC0449 AAB Unknown Malaysia ITC
Boung Fu ITC0940 AAB Unknown Papua New Guinea ITC
Pelipita ITC0472 ABB Unknown Philippines ITC
Higa ITC0464 acuminata subsp. banksii Unknown ITC
Tumay ITC0874 AAB subgr. Iholena Papua New Guinea ITC
Pata ITC0500 ABB subgr. Ney Mannan Unknown ITC
Pisang Jari Buaya ITC0312 AA subgr. Pisang Jari Buaya Malaysia ITC
Pisang Angleng Hitam ITC0475 AAA subgr. Red Unknown ITC
Mata Kun ITC0829 AAA subgr. Red Papua New Guinea ITC
Pogpogon ITC1184 AA Unknown Unknown ITC
Tudlo Tumbaga ITC1231 AA Unknown Unknown ITC
Uwati ITC0373 AA Unknown Papua New Guinea ITC
Racadag ITC0434 AA Unknown Philippines ITC
Khai (Kampengpeth) ITC0532 AA Unknown Unknown ITC
Biu Ketip ITC0319 AAA Unknown Indonesia ITC
Meko ITC0876 AAA Unknown Papua New Guinea ITC
Burro Cemsa ITC1259 ABB Unknown Unknown ITC
Higa ITC0378 acuminata Unknown Unknown ITC
Paracido del Rey ITC1300 AAA subgr. Cavendish Unknown ITC
Valery ITC0048 AAA subgr. Cavendish Unknown ITC
Pisang Serun 404 ITC1348 acuminata subsp. malaccensis Unknown ITC
Pisang Serun 400 ITC1349 acuminata subsp. malaccensis Malaysia ITC
Pisang Awak ITC0213 ABB subgr. Pisang Awak Unknown ITC
Pisang Tunjuk ITC0315 AA subgr. Pisang Jari Buaya Unknown ITC
Figue Famille ITC0743 AAB subgr. Pome Unknown ITC
Khae (Phrae) ITC0660 acuminata subsp. siamea Thailand ITC
Zebrina (G.F.) ITC0966 acuminata subsp. zebrina Unknown ITC
Morong Princesa ITC1150 AA Unknown Unknown ITC
Punti Poroy ITC0478 AA Unknown Unknown ITC
AAcv Rose ITC0712 AA Unknown Indonesia ITC
Lalalur ITC0794 AA Unknown Papua New Guinea ITC
Meleng ITC0821 AA Unknown Papua New Guinea ITC
Pisang Keling ITC0448 AAB Unknown Unknown ITC
Balbisiana ITC0080 balbisiana Unknown Unknown ITC
Tieu Vua Trang ITC1424 AAA subgr. Cavendish Vietnam ITC
Not Named Musa paradisiaca ITC0089 AAA subgr. Cavendish Unknown ITC

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