DArT whole genome profiling of ITC accessions

Publication title or Reference: 

Marker type: 
DArT
Description of the dataset: 

This study was composed of 94 wild accessions and of 481 cultivated accessions. Darwin 5.0 (Perrier and Jacquemoud-Collet, 2006; Perrier et al., 2003) was used to calculate genetic distances between pairs of the 535 accessions (out of 575 of the published study). To do so, both modalities (0,1) were given equal weight using the Sokal and Michener (1958) dissimilarity index as the proportion of unmatching markers. we built a neighbor-joining (NJ) tree (Saitou and Nei, 1987) with the diploid accessions composed of A and B genomes only . With regard to the evolutionary history of cultivated bananas, we then built a second NJ tree with all the accessions composed of A and B genomes under the constraint of the diploid tree topology.

See all accessions used in this study

Showing 40 of 531 accessions
Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
Hybrid
ITC0607 acuminata Unknown Unknown ITC
Hybrid
ITC0608 acuminata Unknown Unknown ITC
Singapuri
ITC0248 balbisiana Unknown Unknown ITC
Banksii
ITC1216 acuminata subsp. banksii Papua New Guinea ITC
Vietnam no.5
ITC1251 AAA subgr. Cavendish Unknown ITC
Taybut
ITC1255 AAA subgr. Cavendish Unknown ITC
Gran Enano
ITC1256 AAA subgr. Cavendish Unknown ITC
Lacatan
ITC0176 AAA subgr. Cavendish Unknown ITC
Robusta (Poyo)
ITC0003 AAA subgr. Cavendish Unknown ITC
Poyo
ITC0345 AAA subgr. Cavendish Unknown ITC
Giant Cavendish
ITC0346 AAA subgr. Cavendish Unknown ITC
73.53
ITC0572 AAA subgr. Cavendish Unknown ITC
Pisang Umbuk
ITC0686 AAA subgr. Cavendish Indonesia ITC
Koutri
ITC0720 AAA subgr. Cavendish Comoros ITC
Dwarf French Plantain
ITC0321 AAB subgr. Plantain Unknown ITC
Cemsa 1735
ITC0398 AAB subgr. Plantain Unknown ITC
Lysoka
ITC0186 AAB subgr. Plantain Unknown ITC
Banane Rouge
ITC1040 Unknown Unknown Unknown ITC
Mutant Palmira
ITC0633 Unknown Unknown Unknown ITC
Mai'a maoli koa'e
ITC1167 AAB subgr. Maia Maoli/Popoulu Unknown ITC
Mai'a popo'ulu lahilahi
ITC1171 AAB subgr. Maia Maoli/Popoulu Unknown ITC
Popoulou
ITC0335 AAB subgr. Maia Maoli/Popoulu Unknown ITC
Pisang Kra
ITC1345 acuminata subsp. malaccensis Malaysia ITC
Malaccensis
ITC0074 acuminata subsp. malaccensis Unknown ITC
Ngenge
ITC1166 AAA subgr. Mutika/Lujugira Unknown ITC
Bakurura
ITC0170 AAA subgr. Mutika/Lujugira Unknown ITC
Kibungo I
ITC0172 AAA subgr. Mutika/Lujugira Unknown ITC
Intokatoke
ITC0082 AAA subgr. Mutika/Lujugira Burundi ITC
Rajapuri India
ITC0280 AAB subgr. Nadan Unknown ITC
Pisang Kayu
ITC0420 AAA subgr. Orotava Indonesia ITC
Nzizi
ITC0334 ABB subgr. Peyan Unknown ITC
Kluai Namwa Khom
ITC0526 ABB subgr. Pisang Awak Unknown ITC
Bom
ITC0053 ABB subgr. Pisang Awak Unknown ITC
Not Named
ITC0318 AA subgr. Pisang Jari Buaya Indonesia ITC
Walha
ITC1033 AAB subgr. Pome Unknown ITC
Lady Finger (Nelson)
ITC0582 AAB subgr. Pome Unknown ITC
Figue Rose Naine
ITC1159 AAA subgr. Red Unknown ITC
Ojue
ITC0731 AAA subgr. Red Unknown ITC
Orishele
ITC1325 AAB subgr. Plantain Unknown ITC
Plantain no.17
ITC0352 AAB subgr. Plantain Unknown ITC

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