DArT whole genome profiling of ITC accessions

Publication title or Reference: 

Marker type: 
DArT
Description of the dataset: 

This study was composed of 94 wild accessions and of 481 cultivated accessions. Darwin 5.0 (Perrier and Jacquemoud-Collet, 2006; Perrier et al., 2003) was used to calculate genetic distances between pairs of the 535 accessions (out of 575 of the published study). To do so, both modalities (0,1) were given equal weight using the Sokal and Michener (1958) dissimilarity index as the proportion of unmatching markers. we built a neighbor-joining (NJ) tree (Saitou and Nei, 1987) with the diploid accessions composed of A and B genomes only . With regard to the evolutionary history of cultivated bananas, we then built a second NJ tree with all the accessions composed of A and B genomes under the constraint of the diploid tree topology.

See all accessions used in this study

Showing 40 of 531 accessions
Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
Hungtu
ITC0372 AAA Unknown Papua New Guinea ITC
Wariam
ITC0376 AAA Unknown Indonesia ITC
Vuvayeka
ITC0426 AAA Unknown Papua New Guinea ITC
Pisang Susu
ITC0441 AAA Unknown Malaysia ITC
Hsein Jen Chiao
ITC0551 AAA Unknown Unknown ITC
Americani
ITC0557 AAA Unknown Unknown ITC
Xiem Mat
ITC1425 AAA-AAB Unknown Vietnam ITC
Gobusik
ITC1189 AAB Unknown Papua New Guinea ITC
Chuoi Man
ITC1379 AAB Unknown Vietnam ITC
Vudi wai wai
ITC0357 AAB Unknown Unknown ITC
Kawijam
ITC0431 AAB Unknown Unknown ITC
Kanara
ITC0452 AAB Unknown Unknown ITC
Baouou 1
ITC0501 AAB Unknown Unknown ITC
Save
ITC0531 AAB Unknown Unknown ITC
Not Named Musa paradisiaca x
ITC0544 AAB Unknown Unknown ITC
Tangtang
ITC0901 AAB Unknown Papua New Guinea ITC
Cardaba
ITC0394 ABB Unknown Unknown ITC
Pelipita
ITC0396 ABB Unknown Unknown ITC
Pelipita Majoncho
ITC0397 ABB Unknown Unknown ITC
Vietnam no.5
ITC1251 acuminata Unknown Unknown ITC
A3617/9
ITC0530 acuminata Unknown Unknown ITC
Type 3
ITC0060 acuminata Unknown Unknown ITC
Hybrid
ITC0606 acuminata Unknown Indonesia ITC
Hybrid
ITC0607 acuminata Unknown Unknown ITC
Hybrid
ITC0608 acuminata Unknown Unknown ITC
Balbisiana
ITC1016 balbisiana Unknown Papua New Guinea ITC
Balbisiana
ITC0211 balbisiana Unknown Unknown ITC
Singapuri
ITC0248 balbisiana Unknown Unknown ITC
Balbisiana
ITC0626 balbisiana Unknown Papua New Guinea ITC
Banksii
ITC1216 acuminata subsp. banksii Papua New Guinea ITC
Taybut
ITC1255 AAA subgr. Cavendish Unknown ITC
Gran Enano
ITC1256 AAA subgr. Cavendish Unknown ITC
Chuoi Tieu Lien
ITC1374 AAA subgr. Cavendish Vietnam ITC
Lacatan
ITC0176 AAA subgr. Cavendish Unknown ITC
Robusta (Poyo)
ITC0003 AAA subgr. Cavendish Unknown ITC
Poyo
ITC0345 AAA subgr. Cavendish Unknown ITC
Giant Cavendish
ITC0346 AAA subgr. Cavendish Unknown ITC
73.53
ITC0572 AAA subgr. Cavendish Unknown ITC
Veimama
ITC0576 AAA subgr. Cavendish Unknown ITC
Pisang Umbuk
ITC0686 AAA subgr. Cavendish Indonesia ITC

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