DArT whole genome profiling of ITC accessions

Publication title or Reference: 

Marker type: 
DArT
Description of the dataset: 

This study was composed of 94 wild accessions and of 481 cultivated accessions. Darwin 5.0 (Perrier and Jacquemoud-Collet, 2006; Perrier et al., 2003) was used to calculate genetic distances between pairs of the 535 accessions (out of 575 of the published study). To do so, both modalities (0,1) were given equal weight using the Sokal and Michener (1958) dissimilarity index as the proportion of unmatching markers. we built a neighbor-joining (NJ) tree (Saitou and Nei, 1987) with the diploid accessions composed of A and B genomes only . With regard to the evolutionary history of cultivated bananas, we then built a second NJ tree with all the accessions composed of A and B genomes under the constraint of the diploid tree topology.

See all accessions used in this study

Showing 40 of 531 accessions
Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
Nzumoheli I
ITC0717 AA Unknown Comoros ITC
Grinai
ITC0950 AA Unknown Papua New Guinea ITC
Pisang Gu Nin Chio
ITC0975 AA Unknown Unknown ITC
Pisang Raja Udang
ITC0976 AA Unknown Unknown ITC
Banane Cochon
ITC1036 AAA Unknown Unknown ITC
Pisang Lemak Manis
ITC1183 AAA Unknown Unknown ITC
Pisang Berangan
ITC1287 AAA Unknown Unknown ITC
NAM
ITC1303 AAA Unknown Unknown ITC
Paji
ITC1305 AAA Unknown Tanzania ITC
Toowoolee
ITC0268 AAA Unknown Unknown ITC
Marauw
ITC0303 AAA Unknown Papua New Guinea ITC
Medja
ITC0306 AAA Unknown Indonesia ITC
Hungtu
ITC0372 AAA Unknown Papua New Guinea ITC
Wariam
ITC0376 AAA Unknown Indonesia ITC
Vuvayeka
ITC0426 AAA Unknown Unknown ITC
Pisang Susu
ITC0441 AAA Unknown Malaysia ITC
Hsein Jen Chiao
ITC0551 AAA Unknown Unknown ITC
Americani
ITC0557 AAA Unknown Unknown ITC
Xiem Mat
ITC1425 AAA-AAB Unknown Vietnam ITC
Gobusik
ITC1189 AAB Unknown Papua New Guinea ITC
Chuoi Man
ITC1379 AAB Unknown Vietnam ITC
Kawijam
ITC0431 AAB Unknown Unknown ITC
Kanara
ITC0452 AAB Unknown Unknown ITC
Baouou 1
ITC0501 AAB Unknown Unknown ITC
Save
ITC0531 AAB Unknown Unknown ITC
Not Named Musa paradisiaca x
ITC0544 AAB Unknown Unknown ITC
Tangtang
ITC0901 AAB Unknown Papua New Guinea ITC
Cardaba
ITC0394 ABB Unknown Unknown ITC
Pelipita
ITC0396 ABB Unknown Unknown ITC
Pelipita Majoncho
ITC0397 ABB Unknown Unknown ITC
A3617/9
ITC0530 acuminata Unknown Unknown ITC
Type 3
ITC0060 acuminata Unknown Unknown ITC
Hybrid
ITC0606 acuminata Unknown Unknown ITC
Hybrid
ITC0607 acuminata Unknown Unknown ITC
Hybrid
ITC0608 acuminata Unknown Unknown ITC
Balbisiana
ITC1016 balbisiana Unknown Papua New Guinea ITC
Balbisiana
ITC0211 balbisiana Unknown Unknown ITC
Singapuri
ITC0248 balbisiana Unknown Unknown ITC
Balbisiana
ITC0626 balbisiana Unknown Papua New Guinea ITC
Banksii
ITC1216 acuminata subsp. banksii Papua New Guinea ITC

Pages