DArT whole genome profiling of ITC accessions

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Marker type: 
DArT
Description of the dataset: 

This study was composed of 94 wild accessions and of 481 cultivated accessions. Darwin 5.0 (Perrier and Jacquemoud-Collet, 2006; Perrier et al., 2003) was used to calculate genetic distances between pairs of the 535 accessions (out of 575 of the published study). To do so, both modalities (0,1) were given equal weight using the Sokal and Michener (1958) dissimilarity index as the proportion of unmatching markers. we built a neighbor-joining (NJ) tree (Saitou and Nei, 1987) with the diploid accessions composed of A and B genomes only . With regard to the evolutionary history of cultivated bananas, we then built a second NJ tree with all the accessions composed of A and B genomes under the constraint of the diploid tree topology.

See all accessions used in this study

Showing 40 of 531 accessions
Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
Ingarama ITC0160 AAA subgr. Mutika/Lujugira Unknown ITC
N'Dundu ITC0732 AAA subgr. Mutika/Lujugira Unknown ITC
Nakitengwa ITC0085 AAA subgr. Mutika/Lujugira Burundi ITC
Ice cream ITC0020 ABB subgr. Ney Mannan Gabon ITC
Banksii ITC0853 acuminata subsp. banksii Papua New Guinea ITC
Pisang Oli ITC1157 AA Unknown Indonesia ITC
Mshale ITC1223 AA Unknown Tanzania ITC
Pamoti On ITC1229 AA Unknown Unknown ITC
Dole ITC0767 ABB subgr. Bluggoe Unknown ITC
Williams (Bell, South Johnstone) ITC0570 AAA subgr. Cavendish Unknown ITC
Indemera y'Imbihire ITC0161 AAA subgr. Mutika/Lujugira Unknown ITC
Ikimaga ITC0171 AAA subgr. Mutika/Lujugira Unknown ITC
Simili Radjah ITC0123 ABB subgr. Peyan Unknown ITC
UPLB ITC0343 acuminata subsp. banksii Unknown ITC
GCTCV-106 ITC1442 AAA subgr. Cavendish Taiwan ITC
Mpiajhap ITC0773 AA Unknown Papua New Guinea ITC
Inori ITC0850 AA Unknown Papua New Guinea ITC
Loibwa ITC0929 AA Unknown Papua New Guinea ITC
Yangun Yefan ITC0984 AA Unknown Papua New Guinea ITC
Palang ITC0910 AAA Unknown Papua New Guinea ITC
Gamaha ITC1006 AAB Unknown Papua New Guinea ITC
Auko ITC0983 AB Unknown Papua New Guinea ITC
Kandrian ITC0803 ABB Unknown Papua New Guinea ITC
Chuoi Tieu Lien ITC1374 AAA subgr. Cavendish Vietnam ITC
Grande Naine ITC0180 AAA subgr. Cavendish Unknown ITC
Mons Mari (Pedwell) ITC0552 AAA subgr. Cavendish Unknown ITC
JD Yangambi ITC1336 AAA subgr. Ibota Unknown ITC
Ingumba y'Imbihire ITC0155 AAA subgr. Mutika/Lujugira Unknown ITC
Inyoya ITC0163 AAA subgr. Mutika/Lujugira Unknown ITC
Ingagara ITC0166 AAA subgr. Mutika/Lujugira Unknown ITC
Ikigeregere ITC0169 AAA subgr. Mutika/Lujugira Unknown ITC
Nyamwihogora ITC0086 AAA subgr. Mutika/Lujugira Burundi ITC
Fougamou 1 ITC0101 ABB subgr. Pisang Awak Gabon ITC
Pelipita ITC0095 ABB Unknown Unknown ITC
Kokopo ITC1243 AA Unknown Papua New Guinea ITC
Pitu ITC0777 AA Unknown Papua New Guinea ITC
Mamakila ITC0780 AA Unknown Papua New Guinea ITC
Mah ITC0807 AA Unknown Papua New Guinea ITC
Maleb ITC0809 AA Unknown Papua New Guinea ITC
Hova ITC0847 AA Unknown Papua New Guinea ITC

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