DArT whole genome profiling of ITC accessions

Publication title or Reference: 

Marker type: 
DArT
Description of the dataset: 

This study was composed of 94 wild accessions and of 481 cultivated accessions. Darwin 5.0 (Perrier and Jacquemoud-Collet, 2006; Perrier et al., 2003) was used to calculate genetic distances between pairs of the 535 accessions (out of 575 of the published study). To do so, both modalities (0,1) were given equal weight using the Sokal and Michener (1958) dissimilarity index as the proportion of unmatching markers. we built a neighbor-joining (NJ) tree (Saitou and Nei, 1987) with the diploid accessions composed of A and B genomes only . With regard to the evolutionary history of cultivated bananas, we then built a second NJ tree with all the accessions composed of A and B genomes under the constraint of the diploid tree topology.

See all accessions used in this study

Showing 40 of 531 accessions
Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
Pisang Serun 400 ITC1349 acuminata subsp. malaccensis Malaysia ITC
Pisang Awak ITC0213 ABB subgr. Pisang Awak Unknown ITC
Pisang Tunjuk ITC0315 AA subgr. Pisang Jari Buaya Unknown ITC
Figue Famille ITC0743 AAB subgr. Pome Unknown ITC
Khae (Phrae) ITC0660 acuminata subsp. siamea Thailand ITC
Zebrina (G.F.) ITC0966 acuminata subsp. zebrina Unknown ITC
Morong Princesa ITC1150 AA Unknown Unknown ITC
Punti Poroy ITC0478 AA Unknown Unknown ITC
AAcv Rose ITC0712 AA Unknown Indonesia ITC
Lalalur ITC0794 AA Unknown Papua New Guinea ITC
Meleng ITC0821 AA Unknown Papua New Guinea ITC
Pisang Keling ITC0448 AAB Unknown Unknown ITC
Balbisiana ITC0080 balbisiana Unknown Unknown ITC
Tieu Vua Trang ITC1424 AAA subgr. Cavendish Vietnam ITC
Not Named Musa paradisiaca ITC0089 AAA subgr. Cavendish Unknown ITC
Malaccensis ITC0250 acuminata subsp. malaccensis Unknown ITC
Bui Se-ed ITC0301 AAA subgr. Mutika/Lujugira Indonesia ITC
Pisang Rotan ITC0313 AA subgr. Pisang Jari Buaya Malaysia ITC
Pisang Nangka ITC1062 AAA-AAB subgr. Pisang Nangka Indonesia ITC
Lai ITC0403 AAA subgr. Red Unknown ITC
IDN107 ITC0710 ABB subgr. Saba Indonesia ITC
Kingala no.1 ITC0737 AAB subgr. Silk Unknown ITC
Tangamor ITC1186 AA Unknown Papua New Guinea ITC
Terema ITC1214 AA Unknown Papua New Guinea ITC
Pu-te La-Bum ITC0446 AA Unknown Malaysia ITC
Pisang Pipit ITC0685 AA Unknown Indonesia ITC
Morong Princesa ITC0972 AA Unknown Unknown ITC
Mun ITC0463 AAA Unknown Papua New Guinea ITC
Ambo I ITC1038 AAB Unknown Unknown ITC
Hybrid ITC0382 acuminata Unknown Unknown ITC
Pa (Songkhla) ITC0408 acuminata Unknown Unknown ITC
Banksii ITC0623 acuminata subsp. banksii Papua New Guinea ITC
Dwarf Parfitt ITC0548 AAA subgr. Cavendish Unknown ITC
Highgate ITC0263 AAA subgr. Gros Michel Unknown ITC
Naine de Nyangezi ITC0147 AAA subgr. Mutika/Lujugira Unknown ITC
Kluai Roi Wi ITC0535 AAB subgr. Pisang Kelat Unknown ITC
Pisang Kermian ITC0437 AA Unknown Malaysia ITC
Pisang Trimulin ITC0699 AA Unknown Indonesia ITC
Muracho ITC0036 AAB Unknown Philippines ITC
Maduranga ITC0035 ABB Unknown Philippines ITC

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