DArT whole genome profiling of ITC accessions

Publication title or Reference: 

Marker type: 
DArT
Description of the dataset: 

This study was composed of 94 wild accessions and of 481 cultivated accessions. Darwin 5.0 (Perrier and Jacquemoud-Collet, 2006; Perrier et al., 2003) was used to calculate genetic distances between pairs of the 535 accessions (out of 575 of the published study). To do so, both modalities (0,1) were given equal weight using the Sokal and Michener (1958) dissimilarity index as the proportion of unmatching markers. we built a neighbor-joining (NJ) tree (Saitou and Nei, 1987) with the diploid accessions composed of A and B genomes only . With regard to the evolutionary history of cultivated bananas, we then built a second NJ tree with all the accessions composed of A and B genomes under the constraint of the diploid tree topology.

See all accessions used in this study

Showing 40 of 531 accessions
Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
Pisang Lilin ITC1121 AA Unknown Unknown ITC
Datil ITC1252 AA Unknown Unknown ITC
Sowmuk ITC0266 AA Unknown Unknown ITC
Pisang Madu ITC0276 AA Unknown Unknown ITC
Pitu ITC0294 AA Unknown Unknown ITC
Pamoti-On ITC0432 AA Unknown Philippines ITC
Tin-Yo I-King ITC0436 AA Unknown Malaysia ITC
Tuu Gia ITC0610 AA Unknown Unknown ITC
Kirun ITC0714 AA Unknown Unknown ITC
Nzumoheli I ITC0717 AA Unknown Comoros ITC
Onato ITC0866 AA Unknown Papua New Guinea ITC
Palang ITC0304 AAA Unknown Unknown ITC
Vudi wai wai ITC0357 AAB Unknown Unknown ITC
Bira ITC0945 AAB Unknown Papua New Guinea ITC
Foulah 4 ITC0051 ABB Unknown Unknown ITC
Agutay ITC1028 acuminata Unknown Unknown ITC
Pa (Musore) no.3 ITC0406 acuminata Unknown Thailand ITC
Pisang Cici Alas ITC0415 acuminata Unknown Indonesia ITC
Balbisiana ITC0211 balbisiana Unknown Unknown ITC
Balbisiana ITC0626 balbisiana Unknown Papua New Guinea ITC
Waigu ITC0465 acuminata subsp. banksii Unknown ITC
Cachaco ITC0643 ABB subgr. Bluggoe Unknown ITC
Long Tavoy ITC0093 acuminata subsp. burmannica Unknown ITC
Calcutta 4 ITC0249 acuminata subsp. burmannicoides Unknown ITC
Veimama ITC0576 AAA subgr. Cavendish Unknown ITC
IB-99 ITC1447 Unknown Unknown Indonesia ITC
Pahang ITC0609 acuminata subsp. malaccensis Unknown ITC
Pisang Sipulu ITC1308 AA subgr. Pisang Jari Buaya Malaysia ITC
Green Red ITC0485 AAA subgr. Red Unknown ITC
Mossi ITC0722 AAA subgr. Red Comoros ITC
Zebrina ITC1177 acuminata subsp. zebrina Unknown ITC
Maia Oa ITC0728 acuminata subsp. zebrina Unknown ITC
Eda An ITC1227 AA Unknown Unknown ITC
Paka ITC1254 AA Unknown Unknown ITC
Paka ITC0320 AA Unknown Unknown ITC
Lidi ITC0395 AA Unknown Unknown ITC
Pa (Patthalong) ITC0409 AA Unknown Thailand ITC
Morong Princesa ITC0440 AA Unknown Unknown ITC
Gu Nin Chio ITC0442 AA Unknown Malaysia ITC
Pisang Madu ITC0507 AA Unknown Unknown ITC

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