DArT whole genome profiling of ITC accessions

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Marker type: 
DArT
Description of the dataset: 

This study was composed of 94 wild accessions and of 481 cultivated accessions. Darwin 5.0 (Perrier and Jacquemoud-Collet, 2006; Perrier et al., 2003) was used to calculate genetic distances between pairs of the 535 accessions (out of 575 of the published study). To do so, both modalities (0,1) were given equal weight using the Sokal and Michener (1958) dissimilarity index as the proportion of unmatching markers. we built a neighbor-joining (NJ) tree (Saitou and Nei, 1987) with the diploid accessions composed of A and B genomes only . With regard to the evolutionary history of cultivated bananas, we then built a second NJ tree with all the accessions composed of A and B genomes under the constraint of the diploid tree topology.

See all accessions used in this study

Showing 40 of 531 accessions
Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
Mala ITC0869 AA Unknown Papua New Guinea ITC
Tainga ITC0894 AA Unknown Papua New Guinea ITC
Manameg Red ITC0996 AA Unknown Papua New Guinea ITC
Manameg Green ITC0997 AA Unknown Papua New Guinea ITC
Pisang Kenning ITC1298 AAB Unknown Indonesia ITC
Vunapope ITC0990 AB Unknown Papua New Guinea ITC
Musa acuminata ssp. banksii ITC0897 acuminata subsp. banksii Papua New Guinea ITC
Williams ITC0365 AAA subgr. Cavendish Unknown ITC
Gros-Michel ITC1122 AAA subgr. Gros Michel Unknown ITC
Iholena ula'ula ITC1174 AAB subgr. Iholena Unknown ITC
Borneo ITC0253 acuminata subsp. microcarpa Unknown ITC
Igitsiri (Intuntu) ITC0081 AAA subgr. Mutika/Lujugira Burundi ITC
Igisahira Gisanzwe (Inyamunyu) ITC0083 AAA subgr. Mutika/Lujugira Burundi ITC
Prata ITC0207 AAB subgr. Pome Unknown ITC
Pome ITC0076 AAB subgr. Pome Unknown ITC
Orishele ITC0517 AAB subgr. Plantain Unknown ITC
Somani ITC0603 AA Unknown Papua New Guinea ITC
Kekiau ITC0776 AA Unknown Papua New Guinea ITC
Katual no.2 ITC0786 AA Unknown Papua New Guinea ITC
Pama ITC0797 AA Unknown Papua New Guinea ITC
Sihir ITC0810 AA Unknown Papua New Guinea ITC
Kenar ITC0816 AA Unknown Papua New Guinea ITC
Kungor ITC0834 AA Unknown Papua New Guinea ITC
Bega ITC0838 AA Unknown Papua New Guinea ITC
Kwosriake ITC0882 AA Unknown Papua New Guinea ITC
Odwa ITC0889 AA Unknown Papua New Guinea ITC
Fu Des ITC0939 AA Unknown Papua New Guinea ITC
Kwaro ITC0943 AA Unknown Papua New Guinea ITC
Wiliman ITC0949 AA Unknown Papua New Guinea ITC
Auko ITC1239 AB Unknown Papua New Guinea ITC
Banksii ITC0867 acuminata subsp. banksii Papua New Guinea ITC
Musa acuminata ssp. banksii ITC0879 acuminata subsp. banksii Papua New Guinea ITC
Musa acuminata ssp. banksii ITC0885 acuminata subsp. banksii Papua New Guinea ITC
Giant Parfitt ITC1246 AAA subgr. Cavendish Unknown ITC
Cocos ITC0724 AAA subgr. Gros Michel Unknown ITC
Tigua ITC0875 AAB subgr. Iholena Papua New Guinea ITC
West India Banana ITC0734 AAB subgr. Pome Unknown ITC
Yangambi no.2 ITC1275 AAB subgr. Silk Unknown ITC
Kar Ngou ITC0196 AAB subgr. Plantain Unknown ITC
Ivi Ivi ITC0919 AA Unknown Papua New Guinea ITC

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