DArT whole genome profiling of ITC accessions

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Marker type: 
DArT
Description of the dataset: 

This study was composed of 94 wild accessions and of 481 cultivated accessions. Darwin 5.0 (Perrier and Jacquemoud-Collet, 2006; Perrier et al., 2003) was used to calculate genetic distances between pairs of the 535 accessions (out of 575 of the published study). To do so, both modalities (0,1) were given equal weight using the Sokal and Michener (1958) dissimilarity index as the proportion of unmatching markers. we built a neighbor-joining (NJ) tree (Saitou and Nei, 1987) with the diploid accessions composed of A and B genomes only . With regard to the evolutionary history of cultivated bananas, we then built a second NJ tree with all the accessions composed of A and B genomes under the constraint of the diploid tree topology.

See all accessions used in this study

Showing 40 of 531 accessions
Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
Balbisiana ITC0545 balbisiana Unknown Unknown ITC
Banksii ITC0621 acuminata subsp. banksii Papua New Guinea ITC
Banksii ITC0955 acuminata subsp. banksii Papua New Guinea ITC
Cachaco ITC0643 ABB subgr. Bluggoe Unknown ITC
Calcutta 4 ITC0249 acuminata subsp. burmannicoides Myanmar ITC
Kunnan ITC1034 AB subgr. Ney Poovan Unknown ITC
Hom Thong Mokho ITC0671 AAA subgr. Rio Thailand ITC
Ngu ITC1358 AA subgr. Sucrier Vietnam ITC
Pisang Mas ITC1403 AA subgr. Sucrier Unknown ITC
Truncata ITC0393 acuminata subsp. truncata Unknown ITC
Pisang Lilin ITC1121 AA Unknown Unknown ITC
Sowmuk ITC0266 AA Unknown Unknown ITC
Niyarma Yik ITC0269 AA Unknown Unknown ITC
Pisang Madu ITC0276 AA Unknown Unknown ITC
Pitu ITC0294 AA Unknown Unknown ITC
Pamoti-On ITC0432 AA Unknown Philippines ITC
Tin-Yo I-King ITC0436 AA Unknown Malaysia ITC
Tuu Gia ITC0610 AA Unknown Unknown ITC
Kirun ITC0714 AA Unknown Unknown ITC
Nzumoheli I ITC0717 AA Unknown Comoros ITC
Onato ITC0866 AA Unknown Papua New Guinea ITC
Grinai ITC0950 AA Unknown Papua New Guinea ITC
Marauw ITC0303 AAA Unknown Papua New Guinea ITC
Palang ITC0304 AAA Unknown Papua New Guinea ITC
Americani ITC0557 AAA Unknown Unknown ITC
Vudi wai wai ITC0357 AAB Unknown Unknown ITC
Bira ITC0945 AAB Unknown Papua New Guinea ITC
Pelipita ITC0396 ABB Unknown Unknown ITC
Pelipita ITC0472 ABB Unknown Philippines ITC
Foulah 4 ITC0051 ABB Unknown Unknown ITC
Agutay ITC1028 acuminata Unknown Unknown ITC
Pa (Musore) no.3 ITC0406 acuminata Unknown Thailand ITC
Pisang Cici Alas ITC0415 acuminata Unknown Indonesia ITC
Balbisiana ITC0211 balbisiana Unknown Unknown ITC
Balbisiana ITC0626 balbisiana Unknown Papua New Guinea ITC
Waigu ITC0465 acuminata subsp. banksii Unknown ITC
Long Tavoy ITC0093 acuminata subsp. burmannica Unknown ITC
Veimama ITC0576 AAA subgr. Cavendish Unknown ITC
IB-99 ITC1447 Unknown Unknown Indonesia ITC
Pahang ITC0609 acuminata subsp. malaccensis Malaysia ITC

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