DArT whole genome profiling of ITC accessions

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Marker type: 
DArT
Description of the dataset: 

This study was composed of 94 wild accessions and of 481 cultivated accessions. Darwin 5.0 (Perrier and Jacquemoud-Collet, 2006; Perrier et al., 2003) was used to calculate genetic distances between pairs of the 535 accessions (out of 575 of the published study). To do so, both modalities (0,1) were given equal weight using the Sokal and Michener (1958) dissimilarity index as the proportion of unmatching markers. we built a neighbor-joining (NJ) tree (Saitou and Nei, 1987) with the diploid accessions composed of A and B genomes only . With regard to the evolutionary history of cultivated bananas, we then built a second NJ tree with all the accessions composed of A and B genomes under the constraint of the diploid tree topology.

See all accessions used in this study

Showing 40 of 531 accessions
Accession Name Picturessort descending Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
Wariam
ITC0376 AAA Unknown Indonesia ITC
Pisang Susu
ITC0441 AAA Unknown Malaysia ITC
Hungtu
ITC0372 AAA Unknown Papua New Guinea ITC
Medja
ITC0306 AAA Unknown Indonesia ITC
Cardaba
ITC0394 ABB Unknown Unknown ITC
Diploid Basilan
ITC0438 AAA Unknown Philippines ITC
Poyo
ITC0345 AAA subgr. Cavendish Nigeria ITC
Plantain no.17
ITC0352 AAB subgr. Plantain Unknown ITC
Guyod
ITC0299 AA Unknown Philippines ITC
Djum Tau
ITC0292 AA Unknown Indonesia ITC
Not Named
ITC0318 AA subgr. Pisang Jari Buaya Indonesia ITC
Dátil
ITC0392 AA Unknown Unknown ITC
Pisang Kayu
ITC0420 AAA subgr. Orotava Indonesia ITC
Kawijam
ITC0431 AAB Unknown Unknown ITC
Mbi Egome 1
ITC0215 AAB subgr. Plantain Nigeria ITC
Dwarf French Plantain
ITC0321 AAB subgr. Plantain Unknown ITC
Heva
ITC0257 AA Unknown Unknown ITC
Giant Cavendish
ITC0346 AAA subgr. Cavendish Unknown ITC
Bakurura
ITC0170 AAA subgr. Mutika/Lujugira Unknown ITC
Malaccensis
ITC0074 acuminata subsp. malaccensis Unknown ITC
Toowoolee
ITC0268 AAA Unknown Unknown ITC
Lysoka
ITC0186 AAB subgr. Plantain Unknown ITC
Rajapuri India
ITC0280 AAB subgr. Nadan Unknown ITC
Kibungo I
ITC0172 AAA subgr. Mutika/Lujugira Unknown ITC
Intokatoke
ITC0082 AAA subgr. Mutika/Lujugira Burundi ITC
Popoulou
ITC0335 AAB subgr. Maia Maoli/Popoulu Unknown ITC
Nzizi
ITC0334 ABB subgr. Pisang Awak Unknown ITC
Cemsa 1735
ITC0398 AAB subgr. Plantain Unknown ITC
Vuvayeka
ITC0426 AAA Unknown Papua New Guinea ITC
Singapuri
ITC0248 balbisiana Unknown Unknown ITC
Type 3
ITC0060 acuminata Unknown Unknown ITC
Congo 2
ITC0027 AAB subgr. Plantain Unknown ITC
Pisang Tongat
ITC0063 AA Unknown Unknown ITC
Lacatan
ITC0176 AAA subgr. Cavendish Unknown ITC
Bungaoisan
ITC0033 AAB subgr. Plantain Indonesia ITC
Kelong Mekintu
ITC0200 AAB subgr. Plantain Unknown ITC
Robusta (Poyo)
ITC0003 AAA subgr. Cavendish Unknown ITC
NBA 14
ITC0267 AA Unknown Unknown ITC
Gabon 2
ITC0017 AAB subgr. Plantain Gabon ITC
Pu-te Wey
ITC0447 AA Unknown Malaysia ITC

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