DArT whole genome profiling of ITC accessions

Publication title or Reference: 

Marker type: 
DArT
Description of the dataset: 

This study was composed of 94 wild accessions and of 481 cultivated accessions. Darwin 5.0 (Perrier and Jacquemoud-Collet, 2006; Perrier et al., 2003) was used to calculate genetic distances between pairs of the 535 accessions (out of 575 of the published study). To do so, both modalities (0,1) were given equal weight using the Sokal and Michener (1958) dissimilarity index as the proportion of unmatching markers. we built a neighbor-joining (NJ) tree (Saitou and Nei, 1987) with the diploid accessions composed of A and B genomes only . With regard to the evolutionary history of cultivated bananas, we then built a second NJ tree with all the accessions composed of A and B genomes under the constraint of the diploid tree topology.

See all accessions used in this study

Showing 40 of 531 accessions
Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
Lalalur ITC0771 AA Unknown Papua New Guinea ITC
Tangamor ITC0779 AA Unknown Papua New Guinea ITC
Kirkirnan ITC0796 AA Unknown Papua New Guinea ITC
Palakaur ITC0799 AA Unknown Papua New Guinea ITC
Yalim ITC0837 AA Unknown Papua New Guinea ITC
Porapora ITC0868 AA Unknown Papua New Guinea ITC
Himone ITC0886 AA Unknown Papua New Guinea ITC
Grupnai ITC0887 AA Unknown Papua New Guinea ITC
Pai ka ITC0892 AA Unknown Papua New Guinea ITC
Tamat ITC0899 AA Unknown Papua New Guinea ITC
Bavaya ITC0903 AA Unknown Papua New Guinea ITC
Suruh ITC0908 AA Unknown Papua New Guinea ITC
Dimaemamosi ITC0920 AA Unknown Papua New Guinea ITC
Yapu Yapu ITC0923 AA Unknown Papua New Guinea ITC
Gilasalasa ITC0932 AA Unknown Papua New Guinea ITC
Buka ITC0938 AA Unknown Papua New Guinea ITC
Yendisi ITC0942 AA Unknown Papua New Guinea ITC
Avalira ITC0986 AA Unknown Papua New Guinea ITC
Tabunatar ITC0988 AA Unknown Papua New Guinea ITC
Tagomor ITC0989 AA Unknown Papua New Guinea ITC
Duhoy ITC1182 AAA Unknown Unknown ITC
Samba ITC0715 AAA Unknown Comoros ITC
Bagul ITC0814 AAA Unknown Papua New Guinea ITC
Yeldem-banz ITC0835 AAA Unknown Papua New Guinea ITC
Kumbak ITC0844 AAA Unknown Papua New Guinea ITC
Mise'ehina ITC0952 AAA Unknown Papua New Guinea ITC
Gamaha ITC1006 AAB Unknown Papua New Guinea ITC
Chuoi Mat ITC1381 AAB Unknown Vietnam ITC
Yourie ITC0826 AAB Unknown Papua New Guinea ITC
Rukumamb ITC0831 AAB Unknown Papua New Guinea ITC
Agu ITC0833 AAB Unknown Papua New Guinea ITC
Horul ITC0870 AAB Unknown Papua New Guinea ITC
Tumay ITC0874 AAB Unknown Papua New Guinea ITC
Wisu ITC0880 AAB Unknown Papua New Guinea ITC
Auko ITC1239 AB Unknown Papua New Guinea ITC
Auko ITC0983 AB Unknown Papua New Guinea ITC
Auko ITC0987 AB Unknown Papua New Guinea ITC
Vunapope ITC0990 AB Unknown Papua New Guinea ITC
Chuoi Nam ITC1382 ABB Unknown Vietnam ITC
Rana ITC0804 ABB Unknown Papua New Guinea ITC

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