DArT whole genome profiling of ITC accessions

Publication title or Reference: 

Marker type: 
DArT
Description of the dataset: 

This study was composed of 94 wild accessions and of 481 cultivated accessions. Darwin 5.0 (Perrier and Jacquemoud-Collet, 2006; Perrier et al., 2003) was used to calculate genetic distances between pairs of the 535 accessions (out of 575 of the published study). To do so, both modalities (0,1) were given equal weight using the Sokal and Michener (1958) dissimilarity index as the proportion of unmatching markers. we built a neighbor-joining (NJ) tree (Saitou and Nei, 1987) with the diploid accessions composed of A and B genomes only . With regard to the evolutionary history of cultivated bananas, we then built a second NJ tree with all the accessions composed of A and B genomes under the constraint of the diploid tree topology.

See all accessions used in this study

Showing 40 of 531 accessions
Accession Name Pictures Accession number Species / Group SubSpecies / SubGroup Origin Collection Available for distribution
GCTCV-106 ITC1442 AAA subgr. Cavendish Taiwan ITC
Mpiajhap ITC0773 AA Unknown Papua New Guinea ITC
Inori ITC0850 AA Unknown Papua New Guinea ITC
Loibwa ITC0929 AA Unknown Papua New Guinea ITC
Yangun Yefan ITC0984 AA Unknown Papua New Guinea ITC
Palang ITC0910 AAA Unknown Papua New Guinea ITC
Kandrian ITC0803 ABB Unknown Papua New Guinea ITC
Dole ITC0767 ABB subgr. Bluggoe Unknown ITC
Grande Naine ITC0180 AAA subgr. Cavendish Unknown ITC
Mons Mari (Pedwell) ITC0552 AAA subgr. Cavendish Unknown ITC
Ingumba y'Imbihire ITC0155 AAA subgr. Mutika/Lujugira Unknown ITC
Inyoya ITC0163 AAA subgr. Mutika/Lujugira Unknown ITC
Ingagara ITC0166 AAA subgr. Mutika/Lujugira Unknown ITC
Ikigeregere ITC0169 AAA subgr. Mutika/Lujugira Unknown ITC
Nyamwihogora ITC0086 AAA subgr. Mutika/Lujugira Burundi ITC
Simili Radjah ITC0123 ABB subgr. Peyan Unknown ITC
Pelipita ITC0095 ABB Unknown Unknown ITC
Kokopo ITC1243 AA Unknown Papua New Guinea ITC
Pitu ITC0777 AA Unknown Papua New Guinea ITC
Mamakila ITC0780 AA Unknown Papua New Guinea ITC
Mah ITC0807 AA Unknown Papua New Guinea ITC
Maleb ITC0809 AA Unknown Papua New Guinea ITC
Hova ITC0847 AA Unknown Papua New Guinea ITC
Tainga ITC0894 AA Unknown Papua New Guinea ITC
Ivi Ivi ITC0919 AA Unknown Papua New Guinea ITC
Manameg Red ITC0996 AA Unknown Papua New Guinea ITC
Manameg Green ITC0997 AA Unknown Papua New Guinea ITC
Iholena ula'ula ITC1174 AAB Unknown Unknown ITC
Musa acuminata ssp. banksii ITC0897 acuminata subsp. banksii Papua New Guinea ITC
Williams ITC0365 AAA subgr. Cavendish Unknown ITC
Gros-Michel ITC1122 AAA subgr. Gros Michel Unknown ITC
Igitsiri (Intuntu) ITC0081 AAA subgr. Mutika/Lujugira Burundi ITC
Igisahira Gisanzwe (Inyamunyu) ITC0083 AAA subgr. Mutika/Lujugira Burundi ITC
Fougamou 1 ITC0101 ABB subgr. Pisang Awak Gabon ITC
Prata ITC0207 AAB subgr. Pome Unknown ITC
Pome ITC0076 AAB subgr. Pome Unknown ITC
Orishele ITC0517 AAB subgr. Plantain Unknown ITC
Somani ITC0603 AA Unknown Papua New Guinea ITC
Kekiau ITC0776 AA Unknown Papua New Guinea ITC
Katual no.2 ITC0786 AA Unknown Papua New Guinea ITC

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